superdistortion in a stratstyle guitar, ducan custom in a les paul style (For me that is!) or the JB in a les paul. not in a strat. the JB is too bright for a stratstyle guitar, and the superdistortion is too warm for a les paul style guitar (when playing 80ies style hair metal that is! for great rocktones, the superD in a LP is almost unbeatable, although I always will prefer my pair of air nortons...).
the tonezone was put in the axis because that was a BASSWOOD body. no lows whatsoever. to compensate that, they put in the tonezone. just like the EVO, the fred, paf pro, breed, d sonic etc etc. those pickups were created for guitars made of basswood. in others they might sound good, and some of them do sound good in other guitars: the paf pro is great for alder/ash guitars, not in a les paul, the EVO is great in les pauls and strats alike. the breed is very nice in stratstyle guitars, but imho, the fred and dsonic and other pickups like that (activator, x2n, super3, etc etc) are only GREAT in basswood guitars (but still 'good'in others).
ok. on topic:
I know that mick mars ( of motley crue) used the superD in a les paul custom (70ies custom, norlin!) but also in a strat. sambora had the paf pro in the bridgeposition of a strat. iron maiden had the superD in bridge of les pauls, explorers and strats. zakk wylde had, ofcourse, the EMG81, metallica had the invador at first, later on emg's. van halen had a normal paf, lightly overwound, if I remember it correctly. the scorpions had just pafs or singlecoils (!), michael schenker had pafs aswell, just 'normal'output, not overwound or something strange.
in other words: the choice is very up to your taste, but my 2 cents are:
JB in les paul if you like it to be a bit more screaming, duncan custom if you like it tight, but not screaming and not having a lot of grit. the superD if you like it even warmer with less grit and less tightness.
SuperD in strat (ash/alder!) if you like it tight, screaming, punchy but not overley bright. the air norton is imho a better choice: little bit tighter, more punch, better pinches, but equally cool for heavy metal like zakk wylde or blues like allman brothers.